PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541653.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 383aa MW: 42878 Da PI: 8.8893

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	74.8	9.1e-24	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ e + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_023541653.1 23 RKQKSLGLLCSNFLSLYNHDEVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	76.1	3.4e-24	157	237	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ ++++l+e+a+ L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_023541653.1 157 RREKSLALLTQNFVKLFICSHVNMISLDEAARLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthttdTRKPAFRWLG 237 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAALPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLSLYN HDEVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKDNCSA SDGTDYAKVS 120 DDEDDDERLS NPTGSQNSTA TMPKSSSSLK AAYADNRREK SLALLTQNFV KLFICSHVNM 180 ISLDEAARLL LGDGHNSSIM RTKVRRLYDI ANVLSSMNLI EKTHTTDTRK PAFRWLGVRG 240 KVKNEPIVLP ESKKRAFGTD VTNVSYKKTK TENSAYPSLN HCLNMQKPVP CENSSQDDSQ 300 NSQDQECERT SKSYQFGPFA PVTVAKVGVL DNNNVKRTHD WESLSSTFRP QYHNQALKEL 360 FSHYVEAWKS WYSEAVKKPI QIS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAALPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLSLYN HDEVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKDNCSA SDGTDYAKVS  120
DDEDDDERLS NPTGSQNSTA TMPKSSSSLK AAYADNRREK SLALLTQNFV KLFICSHVNM  180
ISLDEAARLL LGDGHNSSIM RTKVRRLYDI ANVLSSMNLI EKTHTTDTRK PAFRWLGVRG  240
KVKNEPIVLP ESKKRAFGTD VTNVSYKKTK TENSAYPSLN HCLNMQKPVP CENSSQDDSQ  300
NSQDQECERT SKSYQFGPFA PVTVAKVGVL DNNNVKRTHD WESLSSTFRP QYHNQALKEL  360
FSHYVEAWKS WYSEAVKKPI QIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-127	E2F/DP family protein