PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541399.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HSF

Protein Properties

Length: 367aa MW: 41261.6 Da PI: 6.0847

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.3	3.2e-35	89	179	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+++g++f+v+++ fa+++Lpk+Fkh+nf+SF+RQLn+YgF+kv +++ weF+++ F+kgkk+ll++ XP_023541399.1 89 FLSKTYQLVDDQTVDHVISWNDDGSTFIVWNTLAFARDLLPKHFKHNNFTSFLRQLNTYGFRKVVSDR---------WEFANECFRKGKKQLLCE 174 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_023541399.1 175 IQRRK 179 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MTISYESFCI NGCWSRDQSL DGFFLSWCLI FFDFSVVSSS ISTSSGFGTC LRSFRDLISL 60 ILVPPLMEEP TAKSTSAGAD SPRSVPTPFL SKTYQLVDDQ TVDHVISWND DGSTFIVWNT 120 LAFARDLLPK HFKHNNFTSF LRQLNTYGFR KVVSDRWEFA NECFRKGKKQ LLCEIQRRKL 180 TTPVLTTASN SVVLTAVGAP AIPSANLLTG SSSGEEQVIS SNGTPTKDLA ELIDENDKLK 240 KEKVRLTEQL TEVKSLCNNI FSLMSSFVEN QLKSSCKVRE SVLASAKSLD LFPVKRRSEE 300 DEAAEATEAE TYQIGAKRPR EYREGPEAAE DDTTLRLQPP ERPKVKSDRI ICEQKVDNEK 360 TWHNQVH

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MTISYESFCI NGCWSRDQSL DGFFLSWCLI FFDFSVVSSS ISTSSGFGTC LRSFRDLISL  60
ILVPPLMEEP TAKSTSAGAD SPRSVPTPFL SKTYQLVDDQ TVDHVISWND DGSTFIVWNT  120
LAFARDLLPK HFKHNNFTSF LRQLNTYGFR KVVSDRWEFA NECFRKGKKQ LLCEIQRRKL  180
TTPVLTTASN SVVLTAVGAP AIPSANLLTG SSSGEEQVIS SNGTPTKDLA ELIDENDKLK  240
KEKVRLTEQL TEVKSLCNNI FSLMSSFVEN QLKSSCKVRE SVLASAKSLD LFPVKRRSEE  300
DEAAEATEAE TYQIGAKRPR EYREGPEAAE DDTTLRLQPP ERPKVKSDRI ICEQKVDNEK  360
TWHNQVH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	5e-67	HSF family protein