PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540939.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 139aa    MW: 15605.2 Da    PI: 5.0806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.1e-192677256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeI+d +    r   r++lg+f taeeAa+a+++a+ +++g+
  XP_023540939.1 26 RYRGVRRRP-WGKFAAEICDSR----RqgVRIWLGTFNTAEEAARAYDRAAYNMRGH 77
                    59*******.*******99932....124**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MDDSGGRGKD YTEDSAAAGG GKEIIRYRGV RRRPWGKFAA EICDSRRQGV RIWLGTFNTA  60
EEAARAYDRA AYNMRGHLAI LNFPSEYPPR SSDRGGGGGF CCSSSSRTMR QDEVIEFEYL  120
DDKVLEDLLE YGEESEKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-31ERF family protein