PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540750.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 376aa MW: 41062 Da PI: 8.1958

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.7e-34	50	104	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl XP_023540750.1 50 KPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 104 79****************************************************8 PP
2	Myb_DNA-binding	63.2	5.2e-20	52	103	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_023540750.1 52 RLKWTPDLHDRFVEAVNQLGGAdkaTPKTVMKIMGiPGLTLYHLKSHLQKYR 103 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MYHHHHQQQH HQHNRGKSIH SSDTHLFLQP GNAAAGAGDS SGLVLSTDAK PRLKWTPDLH 60 DRFVEAVNQL GGADKATPKT VMKIMGIPGL TLYHLKSHLQ KYRLSKNVHG QANGGGNGSN 120 KTGTVAAVYG DQRLAAEANG TPRTNNIVVA PQPSSHPNKS LQISETIQMQ IEVQKRLHEQ 180 LEVQRHLQLR IEAQGKYLQT VLEKAQETLG RQDLGSVGLE AAKVQLSELV SKVSTQCLTA 240 AFPELQQTQR LCPQQTQPPD CSMDSCLTSC EASKDQQQQQ QLLLHNSQHA LRPKAIVTDH 300 HGLSMSIGLL QGDKGGEGDN GYSPSFGSKK KEGETAFRYR MAASFLDLNA GEDQQLSNND 360 HAASATCKMF DLNGFS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MYHHHHQQQH HQHNRGKSIH SSDTHLFLQP GNAAAGAGDS SGLVLSTDAK PRLKWTPDLH  60
DRFVEAVNQL GGADKATPKT VMKIMGIPGL TLYHLKSHLQ KYRLSKNVHG QANGGGNGSN  120
KTGTVAAVYG DQRLAAEANG TPRTNNIVVA PQPSSHPNKS LQISETIQMQ IEVQKRLHEQ  180
LEVQRHLQLR IEAQGKYLQT VLEKAQETLG RQDLGSVGLE AAKVQLSELV SKVSTQCLTA  240
AFPELQQTQR LCPQQTQPPD CSMDSCLTSC EASKDQQQQQ QLLLHNSQHA LRPKAIVTDH  300
HGLSMSIGLL QGDKGGEGDN GYSPSFGSKK KEGETAFRYR MAASFLDLNA GEDQQLSNND  360
HAASATCKMF DLNGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-93	G2-like family protein