PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540749.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 382aa MW: 41806.8 Da PI: 8.1958

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.9e-34	50	104	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl XP_023540749.1 50 KPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 104 79****************************************************8 PP
2	Myb_DNA-binding	63.2	5.3e-20	52	103	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_023540749.1 52 RLKWTPDLHDRFVEAVNQLGGAdkaTPKTVMKIMGiPGLTLYHLKSHLQKYR 103 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MYHHHHQQQH HQHNRGKSIH SSDTHLFLQP GNAAAGAGDS SGLVLSTDAK PRLKWTPDLH 60 DRFVEAVNQL GGADKATPKT VMKIMGIPGL TLYHLKSHLQ KYRLSKNVHG QANGGGNGSN 120 KTDMGWRVGT VAAVYGDQRL AAEANGTPRT NNIVVAPQPS SHPNKSLQIS ETIQMQIEVQ 180 KRLHEQLEVQ RHLQLRIEAQ GKYLQTVLEK AQETLGRQDL GSVGLEAAKV QLSELVSKVS 240 TQCLTAAFPE LQQTQRLCPQ QTQPPDCSMD SCLTSCEASK DQQQQQQLLL HNSQHALRPK 300 AIVTDHHGLS MSIGLLQGDK GGEGDNGYSP SFGSKKKEGE TAFRYRMAAS FLDLNAGEDQ 360 QLSNNDHAAS ATCKMFDLNG FS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MYHHHHQQQH HQHNRGKSIH SSDTHLFLQP GNAAAGAGDS SGLVLSTDAK PRLKWTPDLH  60
DRFVEAVNQL GGADKATPKT VMKIMGIPGL TLYHLKSHLQ KYRLSKNVHG QANGGGNGSN  120
KTDMGWRVGT VAAVYGDQRL AAEANGTPRT NNIVVAPQPS SHPNKSLQIS ETIQMQIEVQ  180
KRLHEQLEVQ RHLQLRIEAQ GKYLQTVLEK AQETLGRQDL GSVGLEAAKV QLSELVSKVS  240
TQCLTAAFPE LQQTQRLCPQ QTQPPDCSMD SCLTSCEASK DQQQQQQLLL HNSQHALRPK  300
AIVTDHHGLS MSIGLLQGDK GGEGDNGYSP SFGSKKKEGE TAFRYRMAAS FLDLNAGEDQ  360
QLSNNDHAAS ATCKMFDLNG FS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	2e-94	G2-like family protein