PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540665.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family CAMTA
Protein Properties Length: 961aa    MW: 107668 Da    PI: 6.1705
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1173.82.5e-54131273116
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+fr+DG++w+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr
  XP_023540665.1  13 REaQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 107
                     55599****************************************************************************************** PP

            CG-1  97 rcywlLeeelekivlvhyle 116
                     r+yw+L+++ ++ivlvhy++
  XP_023540665.1 108 RSYWMLDQSCDHIVLVHYRD 127
                     ******************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 961 aa     Download sequence    
MMNDGYDVSD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF  60
FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI  120
VLVHYRDISE GRPGVESVPQ LSPASASSSG SYPSQNHASE YLHSLSPGSV EVSSETGNRT  180
IGSNGVDRQY EISELKSSND REVSQALRRI EEQLSLNEDS LKDIGPYYGH EEGSNFNLID  240
YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHNRY DMAHEFIFGG EGTRPWGDAL  300
DSSKTTVLES QDRHSLLWNE NENPSSSSTV DHEHRNWLDS GGKTFPMLGS CTSPEYASPL  360
DTHDDNSNYH ISFLKQDHGN SFEVDTSLIV AQVQKFTIRQ IVPEQGYATE STKVIIIGSF  420
LCDPSKAPWA CMFGDIEVPL QVVQNGVLCF EAPPHLPGKV AFFITSGNRE PCSEVREFEY  480
KMNVCSHCQS HSSGATKSPE ELLLLVRLVQ LLLSDSLMQK FDEVDSEVRS NNLKAGDDQW  540
SSLIEALLVG SETPSGTMDW LLQELLKDKL YLWLSSQKKD RHDLAGCSLS KKEQGVIHMI  600
SGLGYVWALN PILSCGVNIN FRDINGWTAL HWAARFGREK TVAALIASGA SAGAVTDPSS  660
QDRDGKTAAS IADIHGHKGL AGYLSEVALT SHLSSLTFEE GELSNGSAEI EAEITVNCIS  720
KGNLSSAEDC IPMKNTLAAV RNAAQAAARI QSAFRAHSFR KRQQKEATFA ACIDEYGIDP  780
NDIQGLLAMS KLNFSNRRDY NAAALSIQKK YRGWKGRREF LSMRQKVVKI QAHVRGYQAR  840
KHHKIICWAV GILDKAVLRW RRKGVGLRGF RSEIGSIDES EDGDIIKVFR KQKVEGTIDE  900
AVSRVLSMVD SPDARQQYHR MLEGFREAKA KLDGTGNESA ESTRLSDVSE MEDCNQYPKF  960
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0CAMTA family protein