PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | CAMTA | ||||||||
Protein Properties | Length: 961aa MW: 107668 Da PI: 6.1705 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 173.8 | 2.5e-54 | 13 | 127 | 3 | 116 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+fr+DG++w+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr XP_023540665.1 13 REaQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 107 55599****************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+L+++ ++ivlvhy++ XP_023540665.1 108 RSYWMLDQSCDHIVLVHYRD 127 ******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 961 aa Download sequence |
MMNDGYDVSD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF 60 FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI 120 VLVHYRDISE GRPGVESVPQ LSPASASSSG SYPSQNHASE YLHSLSPGSV EVSSETGNRT 180 IGSNGVDRQY EISELKSSND REVSQALRRI EEQLSLNEDS LKDIGPYYGH EEGSNFNLID 240 YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHNRY DMAHEFIFGG EGTRPWGDAL 300 DSSKTTVLES QDRHSLLWNE NENPSSSSTV DHEHRNWLDS GGKTFPMLGS CTSPEYASPL 360 DTHDDNSNYH ISFLKQDHGN SFEVDTSLIV AQVQKFTIRQ IVPEQGYATE STKVIIIGSF 420 LCDPSKAPWA CMFGDIEVPL QVVQNGVLCF EAPPHLPGKV AFFITSGNRE PCSEVREFEY 480 KMNVCSHCQS HSSGATKSPE ELLLLVRLVQ LLLSDSLMQK FDEVDSEVRS NNLKAGDDQW 540 SSLIEALLVG SETPSGTMDW LLQELLKDKL YLWLSSQKKD RHDLAGCSLS KKEQGVIHMI 600 SGLGYVWALN PILSCGVNIN FRDINGWTAL HWAARFGREK TVAALIASGA SAGAVTDPSS 660 QDRDGKTAAS IADIHGHKGL AGYLSEVALT SHLSSLTFEE GELSNGSAEI EAEITVNCIS 720 KGNLSSAEDC IPMKNTLAAV RNAAQAAARI QSAFRAHSFR KRQQKEATFA ACIDEYGIDP 780 NDIQGLLAMS KLNFSNRRDY NAAALSIQKK YRGWKGRREF LSMRQKVVKI QAHVRGYQAR 840 KHHKIICWAV GILDKAVLRW RRKGVGLRGF RSEIGSIDES EDGDIIKVFR KQKVEGTIDE 900 AVSRVLSMVD SPDARQQYHR MLEGFREAKA KLDGTGNESA ESTRLSDVSE MEDCNQYPKF 960 V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | CAMTA family protein |