PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540598.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 279aa    MW: 30745.7 Da    PI: 8.5032
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.43.1e-3268123258
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     ++v+YkeClkNhAas+Gg+a+DGCgEfmps geeg+++al+C+AC+CHRnFHR+e +
  XP_023540598.1  68 KHVKYKECLKNHAASMGGNATDGCGEFMPS-GEEGSIEALTCSACNCHRNFHRKEID 123
                     679**************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEQTTEHPPI PIPLNARYGG HHHHDPSATC NHIIAAASAV NGGNPLPPFH MEIDLHRNNN  60
NNSNNNKKHV KYKECLKNHA ASMGGNATDG CGEFMPSGEE GSIEALTCSA CNCHRNFHRK  120
EIDHPLLGRK LLVGGKNMIA MPETTTFAYP TAAGAAFLSS RAMTAQPHHL IMPYNMLGGG  180
GGGEEQEEAA GVRAYSGQMT NKKRFRTKFT GEQKERMLRF AEKVGWKIQK EEESVVQQLC  240
EEIGVKRRVL KVWMHNNKHN LGTKETTSPS PSHSPTPLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.17e-68ZF-HD family protein