PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 532aa MW: 59427.1 Da PI: 5.0882 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 435.8 | 3.2e-133 | 163 | 531 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e L +cA+a+ ++d+ + ++l+++l+ ++s +g+p+qRl ay++eAL ar a+s+s++ykal+++e se l+++++++ev+P++kf++l XP_023540448.1 163 KEMLCACARAIGENDMLAGEWLISELRGMVSVSGEPIQRLGAYLLEALVARTASSGSTIYKALRCKEPI---GSELLSYMNILYEVCPYFKFGYL 254 789*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI ea++ge+rvHiiDf+i+qG QW++L+qaLa+Rp+gpp++ iTg+++++s + +e +++rL+++Ae+l vpfef+ +a + +++ XP_023540448.1 255 SANGAIAEAIKGENRVHIIDFQIGQGNQWMTLMQALANRPGGPPKITITGIDDSTSAfsRGGGVEIVAKRLSNLAESLMVPFEFHG-IAGSASEI 348 *****************************************************9988999999***********************.6999**** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 +le+L+v+pgEa+aVn++l lh++ desv ++++rd++L+lvkslsPkvv+vveqe++ n+++F+ rfl++l+yy+a+f+s++++lpre++eri+ XP_023540448.1 349 QLEDLKVQPGEAIAVNFALVLHHMTDESVGSPNHRDRILRLVKSLSPKVVTVVEQESNNNTAPFFPRFLQTLNYYTAIFESIDMTLPREHKERIN 443 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 vE+++l+r+ivn+vacegaer+erhe l+kWr+r+ +aGF+p pls ++++++++ll+++ + y++ee++g+l+lgW +++Lv+ SaW XP_023540448.1 444 VEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFEPHPLSPFVNSTIEALLKNYCD-KYTLEERDGALYLGWLNQNLVTSSAW 531 ************************************************************95.5************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 532 aa Download sequence |
MQEASRKKVS DQSHRFYEQP QQEPGSYYWP PINQNHLPSE AFNPYCNLES SLGTSSYPPQ 60 NSSSTVSFTS NGSPSHQECH SYPLEPYYSP DHNRGSPVSR SCLTDDADDD LRHKIRELEI 120 AILGPDSEMF DIYSVSNPVN PVLSEQEAGW KDVAEIISRR DLKEMLCACA RAIGENDMLA 180 GEWLISELRG MVSVSGEPIQ RLGAYLLEAL VARTASSGST IYKALRCKEP IGSELLSYMN 240 ILYEVCPYFK FGYLSANGAI AEAIKGENRV HIIDFQIGQG NQWMTLMQAL ANRPGGPPKI 300 TITGIDDSTS AFSRGGGVEI VAKRLSNLAE SLMVPFEFHG IAGSASEIQL EDLKVQPGEA 360 IAVNFALVLH HMTDESVGSP NHRDRILRLV KSLSPKVVTV VEQESNNNTA PFFPRFLQTL 420 NYYTAIFESI DMTLPREHKE RINVEQHCLA RDIVNIVACE GAERVERHEL LGKWRSRFLM 480 AGFEPHPLSP FVNSTIEALL KNYCDKYTLE ERDGALYLGW LNQNLVTSSA WI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |