PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540358.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 339aa MW: 36204 Da PI: 10.3536

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.3e-39	71	130	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++lkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_023540358.1 71 DATLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 130 7789*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MNFSSIPPYL HPSNWQQQVS HQLGTTTTTT TTSAPTSQLP PPPPPPPPHG GSIRPGSMAE 60 RARLANVPMP DATLKCPRCE STNTKFCYFN NYSLTQPRHF CKTCRRYWTR GGALRNVPVG 120 GGCRRNKRSK GRNSKSPPVS SDRQQQTSGS ANSSSSAIAS NNNSGLSPQI PPHRFMAPLH 180 HHHHHQQLTD FDIGGFNYGG GGVLSAPATA TGDLSFQLGN TNLAGGTSIG SLLGFDQQWR 240 LQQQAPQFPF LSSLDPFDGG SSGGGGGGDG SGWQMRPKLP SGSRNLTQMG NSVKMEGTPN 300 HEANIGRQFV GNEQYWSGGS MAWSDLSGFS SSSSARNPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	1e-39	Dof family protein