PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 19249.6 Da PI: 10.8481 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5e-18 | 100 | 148 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 ++y+GVr++k +g+W+AeIrd + + r+r++lg++ taeeA + ++ r+++ XP_023540316.1 100 CRYRGVRQRK-WGKWAAEIRDpF-K---RARIWLGTYNTAEEASRVYESKRLEF 148 78*******9.**********55.3...5********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MLLKXKKKKK KKSSRNPLEE QKMSRKIRVI CSDPDGTDSS SSENERDETK SSKSKRIVRE 60 IHFPNFPSRA SKSIDDEISR SSSQDSNNGD KSFTNRGTAC RYRGVRQRKW GKWAAEIRDP 120 FKRARIWLGT YNTAEEASRV YESKRLEFQT AMAAAAAPKP PAGSKLLIC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 6 | 12 | KKKKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 2e-31 | ERF family protein |