PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540261.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 323aa MW: 35503.5 Da PI: 6.9351

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	7.1e-33	163	221	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers++d ++v++tYeg+H+h+ XP_023540261.1 163 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQ 221 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEKKFEDSLM GSATSTGIYS QTVFSDEFPV GGSGFSGVFD LPCDDDHKAS CCSSSSFDLF 60 GGGIGFHDFY NPSSMFDLLS TTAPPLQPPL SSPSSTVPES SEVLNAPTTP NSSSVSNSSS 120 NEASPIEEVD KNKTSKMLKP KKNQKKQRER RFAFMTKSDI DHLDDGYRWR KYGQKAVKNS 180 PYPRSYYRCT TSQCGVKKRV ERSSSDHSIV ITTYEGQHTH QSPVMPRGSI RILSESTNCL 240 VADHDVATTG ILFQHNVPGQ PFMYNPLQPF LTNDSSFLSP RPPPSSVPPP SLSSRASLLQ 300 DNGLLQDLVP LQVRKEPKDE QNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	1e-46	WRKY family protein