PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540187.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HSF

Protein Properties

Length: 526aa MW: 58034.3 Da PI: 4.6184

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.5	2.4e-34	103	194	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed++l+ ++sw + g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F++gk++ll++ XP_023540187.1 103 FLWKTFDLVEDPALDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFANDAFQRGKRHLLKN 188 99*************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_023540187.1 189 IQRRKS 194 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MNPLEESDSV SPIGANSSSA QSDSDAAGVS SDPELMMSIG FSSSPTGGGS WAENPMPSSS 60 AHNLFDVMPK PDKVASDPLS MWGSGTDVPQ PLEGLHGQLV PPFLWKTFDL VEDPALDPIV 120 SWGSAGQSFV VWDPVEFSRV ILPSNFKHNN FSSFVRQLNT YGFRKIDADK WEFANDAFQR 180 GKRHLLKNIQ RRKSPHSQQV GSLIGPSTGP GKSGLEDEIG RLKKERSMLM QEVVELQQEQ 240 KGTAQHVKTV NRRLQSAEQK QNQMISFLAK LLQNPEFLFR LQKKKEQRDI DSPRMKRKFV 300 KQHQHETDGF TPFMEGQIVK YQPDWGSLAT PELNPSLLEG PAAYLLQGVS GDLGSIPESM 360 SSFQYENDPS RDVITSEELA FHHGIVKPTE LSVEPSNMSM EDQHSKGKAI GSPSQDVNPD 420 YFVSLAESIQ QFSHLGTGNV IKPEEIWTTG LNVDTGTSSS NTELWSNPVD FEDPFLQGSS 480 GLSPFWDLGS LQAGDSHTNT WSASGFPFDD PDSRACPENT DDSEDK

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MNPLEESDSV SPIGANSSSA QSDSDAAGVS SDPELMMSIG FSSSPTGGGS WAENPMPSSS  60
AHNLFDVMPK PDKVASDPLS MWGSGTDVPQ PLEGLHGQLV PPFLWKTFDL VEDPALDPIV  120
SWGSAGQSFV VWDPVEFSRV ILPSNFKHNN FSSFVRQLNT YGFRKIDADK WEFANDAFQR  180
GKRHLLKNIQ RRKSPHSQQV GSLIGPSTGP GKSGLEDEIG RLKKERSMLM QEVVELQQEQ  240
KGTAQHVKTV NRRLQSAEQK QNQMISFLAK LLQNPEFLFR LQKKKEQRDI DSPRMKRKFV  300
KQHQHETDGF TPFMEGQIVK YQPDWGSLAT PELNPSLLEG PAAYLLQGVS GDLGSIPESM  360
SSFQYENDPS RDVITSEELA FHHGIVKPTE LSVEPSNMSM EDQHSKGKAI GSPSQDVNPD  420
YFVSLAESIQ QFSHLGTGNV IKPEEIWTTG LNVDTGTSSS NTELWSNPVD FEDPFLQGSS  480
GLSPFWDLGS LQAGDSHTNT WSASGFPFDD PDSRACPENT DDSEDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-84	HSF family protein