PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 470aa MW: 52407.1 Da PI: 7.2732 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 106.1 | 2.8e-33 | 18 | 108 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++++++++++sw+++++sfvv+++ efa+ +Lp++Fkh+nf+SF+RQLn+YgFkk+++e+ weF+++ F k++k+ll++ XP_023539978.1 18 FLIKTYDMVDESATDKIVSWTSSKKSFVVWNPPEFARLLLPTFFKHNNFSSFIRQLNTYGFKKIDSER---------WEFANDDFIKDQKHLLKN 103 9****************************************************************999.........****************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_023539978.1 104 IHRRK 108 ***98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence |
MEGAAGGGGT GGAGPAPFLI KTYDMVDESA TDKIVSWTSS KKSFVVWNPP EFARLLLPTF 60 FKHNNFSSFI RQLNTYGFKK IDSERWEFAN DDFIKDQKHL LKNIHRRKPI HSHSTPPGSL 120 GDPERAAFED EIDRLSRKKT TLEADISRFK QQKSTAKTQL QDLTVKVESM EKRQKNLLAF 180 LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPSADHSQP VLENSFLDNH SSSRSGSGNI 240 FHQDFSHKMR LETSSVSDIN LLSCSTQSSN EGGGSSQRNM SKLDTRGVQE SHHFAAETLD 300 LSDTGTSFVL KRDSSLSGKS PNDESPCLHS LQPNVSSKED GESHISCHLN LTLASSSLRV 360 NDADYLGRMP QLGQNLRKSS GSKVNSNGKE SDMRLFTKNI NLDEGTTTLC LKETSSNNHG 420 PPANPVRVND VFWEQFLTER PGCPESEEAS SNYRENLYKE PDEGRSGLSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13980.1 | 1e-144 | HSF family protein |