PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 757aa MW: 85736 Da PI: 5.3439 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 382.3 | 5.7e-117 | 382 | 753 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+av+++d+++a++lL++++++asp gd +qRla+yf+ +L+arla+++s++yk l ++ts +++l+a++l+ ++P+ k+s+ XP_023539969.1 382 LRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASYFADGLEARLAGTGSQIYKGLINKRTS---AADVLKAYHLYLAACPFRKISN 473 6789************************************************************888888...89******************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 +t N++ + a e+++++H+iDf+i +G+QWp+L+q L+ R++gpp+lRiTg++ p++g +e++eetg+rLa +Ae+++vpfe+n+ +ak++e+ XP_023539969.1 474 FTSNRTTMIASETATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGfrPAERVEETGRRLAAYAETFNVPFEYNA-IAKKWET 567 *********************************************************9*****************************.7****** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +++e+L++++gE ++Vn+ ++ ++ll+esv++es+r++vL+l+ +++P++++ + +n++ F++rf eal ++sa+fd+le+ +pre+ er+ XP_023539969.1 568 ITVEDLNIDQGEFIVVNCLYRAKNLLEESVTTESPRNTVLRLIHKINPNLFITGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERM 662 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +Ere++gre+ nv aceg er+er et+++W+ r+++aGF+++p+ ++ + a +r + + + ++e+s ++++gWk+r ++++SaW+ XP_023539969.1 663 LLEREIFGREALNVTACEGWERVERPETYKQWQFRIMRAGFEQLPFHPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWK 753 **************************************************************999*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 757 aa Download sequence |
MDPRLRRHGG SMNGILLDNG SFLVQSQEDG IGSIFQNTIM SHSFQEFNCL PPDPSPSNIA 60 SSSSVITSSS NDASHEEDYL EDCDFSDAVL RFINQILMEE DMEDKTCMLQ DSLDLQAAEK 120 PFYEVLGKKY PPSPEPNRSL ANQYSDGFNE ELCGDSSNYL IGYNNTSYYG DDNAFETQSG 180 DVFRIRSTLG DTISPSSNSS SNRITNGADG WVDFSNNAIR VPEPNNRSQS IWQFQKGLEE 240 ASKFLPGGNN LCLDFEGNES ATQGLDEGTS QMYVKSARND QRKNLSLESR VRKNLHDEDG 300 DLEEERSSKQ AAISTESTLR SKMFDIVLLC SAGEGHDRLV SFRQELQNAK IKSMLQTGQL 360 KESNGGRGRR KKQSGKKEVV DLRTLLISCA QAVAADDHRN ASELLKQVRQ HASPFGDGNQ 420 RLASYFADGL EARLAGTGSQ IYKGLINKRT SAADVLKAYH LYLAACPFRK ISNFTSNRTT 480 MIASETATKL HVIDFGILYG FQWPTLIQRL SWRKGGPPKL RITGIEFPQP GFRPAERVEE 540 TGRRLAAYAE TFNVPFEYNA IAKKWETITV EDLNIDQGEF IVVNCLYRAK NLLEESVTTE 600 SPRNTVLRLI HKINPNLFIT GVVNGAYNAP FFVTRFREAL FHFSAIFDML ETVVPREDWE 660 RMLLEREIFG REALNVTACE GWERVERPET YKQWQFRIMR AGFEQLPFHP EIFERAVEKV 720 RSSYHRDFLI DEDSRWILQG WKGRIIYAIS AWKPTQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 0.0 | GRAS family protein |