PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539870.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C3H
Protein Properties Length: 716aa    MW: 79881.5 Da    PI: 5.5523
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.54e-07120142427
                     ---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     ++C ff++ G C  GdrC F Hgp
  XP_023539870.1 120 VPCIFFQK-GLCLKGDRCAFLHGP 142
                     79******.*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 716 aa     Download sequence    
MVGGGPQVLE QQQQSLPQPL SAANEEAVKR NTDCVYFLAS PLTCKKGSEC EYRHSEYARV  60
NPRDCWFWLN GNCLNPKCSF RHPPLDGLVG TPHSTNSSSQ IPSQTSAIPS APVNSSKQGV  120
PCIFFQKGLC LKGDRCAFLH GPSPVPMNKV PQTTANAQTG KPPSVKKVSG GTLRSGQEQK  180
IPRADCSKSI DGAPLKLATK DETVPSNVGD VNEKSGPPAE VADDGSRYKA TNSLPVLNES  240
SLSRASRLQP SHVIDDYGLQ NGKDADEFLR ETSPGFDVLV DDELRGSGYY ESEEQYGRTR  300
GHEGTNMISM NDYEIGHSSD YKMISDVDHD VYNNVIDYDY DSRQGQYGWD RHRSSSEKFS  360
MGSAQMDKRL FPKSNSPEHI QTMDLRHRLN KQRRGNGLRS VINNEHTAGH PEERNYHAPR  420
RDSHLSQENS TSNRLRGRIK LPRIPSPVRN SNLQPERDLN RGRPWGRLLP GRSQSLSHEG  480
SNRDEMKGRL EEDYNNEGRN FNGLSSRRDR MDGTSDFAAP KSLAALKDKH VGTKEQQTLG  540
KRKGSDNEQS GGELSFEGPK SLGEILKKKR QVKSDVDPLV NNDERERCVG SIERSTTPLL  600
KQSGLSSTAK QESNSLEGTK SSPAEAFGLE ENIDVSHHLS SQLMHSTDGH EIEAYDETLE  660
EDHEYEGDDQ RDCEYKYEQV DYGEYNYEEG ENINPEEEYM DDEDGDDFAK KIGVMS