PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C3H | ||||||||
Protein Properties | Length: 716aa MW: 79881.5 Da PI: 5.5523 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 21.5 | 4e-07 | 120 | 142 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C ff++ G C GdrC F Hgp XP_023539870.1 120 VPCIFFQK-GLCLKGDRCAFLHGP 142 79******.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 716 aa Download sequence |
MVGGGPQVLE QQQQSLPQPL SAANEEAVKR NTDCVYFLAS PLTCKKGSEC EYRHSEYARV 60 NPRDCWFWLN GNCLNPKCSF RHPPLDGLVG TPHSTNSSSQ IPSQTSAIPS APVNSSKQGV 120 PCIFFQKGLC LKGDRCAFLH GPSPVPMNKV PQTTANAQTG KPPSVKKVSG GTLRSGQEQK 180 IPRADCSKSI DGAPLKLATK DETVPSNVGD VNEKSGPPAE VADDGSRYKA TNSLPVLNES 240 SLSRASRLQP SHVIDDYGLQ NGKDADEFLR ETSPGFDVLV DDELRGSGYY ESEEQYGRTR 300 GHEGTNMISM NDYEIGHSSD YKMISDVDHD VYNNVIDYDY DSRQGQYGWD RHRSSSEKFS 360 MGSAQMDKRL FPKSNSPEHI QTMDLRHRLN KQRRGNGLRS VINNEHTAGH PEERNYHAPR 420 RDSHLSQENS TSNRLRGRIK LPRIPSPVRN SNLQPERDLN RGRPWGRLLP GRSQSLSHEG 480 SNRDEMKGRL EEDYNNEGRN FNGLSSRRDR MDGTSDFAAP KSLAALKDKH VGTKEQQTLG 540 KRKGSDNEQS GGELSFEGPK SLGEILKKKR QVKSDVDPLV NNDERERCVG SIERSTTPLL 600 KQSGLSSTAK QESNSLEGTK SSPAEAFGLE ENIDVSHHLS SQLMHSTDGH EIEAYDETLE 660 EDHEYEGDDQ RDCEYKYEQV DYGEYNYEEG ENINPEEEYM DDEDGDDFAK KIGVMS |