PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YA | ||||||||
Protein Properties | Length: 322aa MW: 35714.5 Da PI: 9.1045 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 95.7 | 5.4e-30 | 154 | 210 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep+YVNaKQy++I++RRq Rak+ +++ +++rkpy+heSRh hA+rRpRgsgGrF XP_023539687.1 154 DEPIYVNAKQYHGIIRRRQIRAKAMMKNRP-ARTRKPYIHESRHLHAMRRPRGSGGRF 210 79****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MAPQTGYLKE HEGIVPNSLG QLSSSPTRLW SAAFGLGSHS IFGDFGQVKE QLDSNGKEFA 60 ATKQAAHGLE KLNTAPFSIY PGDTKNSVDA QKPSPVFSLQ SPLSEYHNRF ELGFGQPLIC 120 ENYPYMEQHY GILSAYGPQI PGRVMLPMRL TTDDEPIYVN AKQYHGIIRR RQIRAKAMMK 180 NRPARTRKPY IHESRHLHAM RRPRGSGGRF LNMKNQPNEK SSMVPKKVDD VNLSDLTGSQ 240 CSEVLQSESG TLNSQNEAKE GRGFNLLSSE VSSMFSRGLQ RFQINHIGPS MQSLAEIIDG 300 GGHGMVLPKW VAAADNCCDL CF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 9e-59 | NF-YA family protein |