PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 376aa MW: 43672.3 Da PI: 4.6775 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 100.5 | 1.6e-31 | 16 | 107 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 F+kklye+++d++++++i ws +++sf ++d ++f ++LpkyFkhsnf+SF+RQLn+YgF+k++++ w F+ + F kg+k+ll++ XP_023539565.1 16 FVKKLYEMVDDDATNSIIAWSPTEDSFTIVDITQFCVHMLPKYFKHSNFSSFMRQLNIYGFRKIDTDC---------WVFATDGFIKGQKHLLKN 101 9********************999****************************************9987.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k+ XP_023539565.1 102 IYRRKN 107 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MVKSAAERQG STVAPFVKKL YEMVDDDATN SIIAWSPTED SFTIVDITQF CVHMLPKYFK 60 HSNFSSFMRQ LNIYGFRKID TDCWVFATDG FIKGQKHLLK NIYRRKNIQG TDQHNAAQPQ 120 DKSEGQVELH DYTELWKEVE SLKIDKNSVM QELVKLKQHQ ETSEDKLLVL RDRLQGVEKN 180 QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADTSNMLEQ IPDDKQVPSN GMIVRYHQRP 240 LDELPANLLP AVSGMGKQQE TDPFPDGMKD FFLNSDFMKV LMDEKLCLDN HTQFVLPDVQ 300 DVAWEQLLLA SPFSGNSDNA TKIDHEKRSV DNEDDELDME TIDTRTHEEK SQDFEILIRQ 360 MERCETFEMS QRLDES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67970.1 | 1e-94 | HSF family protein |