PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539565.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 376aa    MW: 43672.3 Da    PI: 4.6775
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind100.51.6e-31161072102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F+kklye+++d++++++i ws +++sf ++d ++f  ++LpkyFkhsnf+SF+RQLn+YgF+k++++          w F+ + F kg+k+ll++
  XP_023539565.1  16 FVKKLYEMVDDDATNSIIAWSPTEDSFTIVDITQFCVHMLPKYFKHSNFSSFMRQLNIYGFRKIDTDC---------WVFATDGFIKGQKHLLKN 101
                     9********************999****************************************9987.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k+
  XP_023539565.1 102 IYRRKN 107
                     ****97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MVKSAAERQG STVAPFVKKL YEMVDDDATN SIIAWSPTED SFTIVDITQF CVHMLPKYFK  60
HSNFSSFMRQ LNIYGFRKID TDCWVFATDG FIKGQKHLLK NIYRRKNIQG TDQHNAAQPQ  120
DKSEGQVELH DYTELWKEVE SLKIDKNSVM QELVKLKQHQ ETSEDKLLVL RDRLQGVEKN  180
QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADTSNMLEQ IPDDKQVPSN GMIVRYHQRP  240
LDELPANLLP AVSGMGKQQE TDPFPDGMKD FFLNSDFMKV LMDEKLCLDN HTQFVLPDVQ  300
DVAWEQLLLA SPFSGNSDNA TKIDHEKRSV DNEDDELDME TIDTRTHEEK SQDFEILIRQ  360
MERCETFEMS QRLDES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.11e-94HSF family protein