PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WOX | ||||||||
Protein Properties | Length: 247aa MW: 28053.3 Da PI: 6.0385 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.9 | 3.5e-13 | 93 | 130 | 24 | 57 |
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 yps+++++e++++l +++e++V++WFqNrRa+ k+ XP_023539556.1 93 YPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 130 9***********************************97 PP | |||||||
2 | Wus_type_Homeobox | 59.2 | 9.7e-20 | 93 | 132 | 26 | 65 |
Wus_type_Homeobox 26 tPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 P+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq XP_023539556.1 93 YPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 132 59************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MMDPYHHHHQ NPPLRDDHLR YLTGTTAGAL YVKVMTDEQL ETLRKQIAVY ATICEQLVEM 60 HKTLTARQDL KGAAMLFSFT SFNSMDELGL LLYPSKQKIK EITSELGQHG QISESNVYNW 120 FQNRRARSKR KQQGTAPAYG ESELDTEVES PKDKKTKPVD FQTPQTSAPL GENMGFQSPE 180 MHYELHFLDP NTNKADTLFP SNGSSKTART FSQMSSYEGN EQLTGKIETP ENYSLYSQAE 240 GCMTEQP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 132 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 3e-47 | WOX family protein |