PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 246aa MW: 26770.1 Da PI: 6.6368 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.1 | 3.5e-37 | 6 | 61 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrn+P+Ggg+rkn++ XP_023539523.1 6 PNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPIGGGCRKNRRP 61 58***************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MVEMSPNCPR CGSSNTKFCY YNNYSLTQPR YFCKGCRRYW TKGGSLRNIP IGGGCRKNRR 60 PAKPLALTPS SSTSKFHNDR SCLGHHHRLP DPNGSPTIDL AVVYANFVNQ KPDMPGTFPM 120 TDTTASNGAG NFLGSGESGG NFCEFSMQEC GLGASDYQVA DCFGLEEKND DQVAAAAAAR 180 ELQLPPLPGE DMVVGGWSSS MIMVNHLCLQ PTRVEMFGME AQDPNLVGGN WSPIDLPSNY 240 DTFSRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 1e-50 | Dof family protein |