PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539511.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 384aa MW: 42137.1 Da PI: 8.9046

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.4	1.6e-28	182	231	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt++LH+rFv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ XP_023539511.1 182 PRMRWTTTLHARFVHAVKLLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 231 9************************************************* PP
2	Myb_DNA-binding	45.1	2.3e-14	183	231	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWTt ++ ++v+avk+lGg+ t+k++ + m k +tl ++ks++q XP_023539511.1 183 RMRWTTTLHARFVHAVKLLGGHeraTPKSVLELMDvKDLTLAHVKSHLQ 231 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MELFPAQPDL SLQISPPNSS TNSKPSSNGG WRRQHPISSM PSQNPLDLVS WNNKLPSTNP 60 SSSSSSNFDP SPLLSNPNSS SDFLHRHFPT AATAANGGGA GTGGLFHRHL HDLHHQGLGF 120 LRPIRGIPVY QNSPSSSSSS SFSYPIFGGG GNGGGGGQFN YNTAHRSRFL GRFPTKRNVR 180 APRMRWTTTL HARFVHAVKL LGGHERATPK SVLELMDVKD LTLAHVKSHL QVSISFSLFG 240 IDMRFGYDLN VGNSDVYDQN GSSGDTTNED ITYENEKSSR IRSSAPTTDD EHGYRQTVGD 300 KQDHHHHHPH KDFYSLWSNS SREALLQGTK NHSFENQPSQ HDQNYLEAKC SSHERTSDGS 360 SLTNLSAGTS PEKPNLEFTL GRSI

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MELFPAQPDL SLQISPPNSS TNSKPSSNGG WRRQHPISSM PSQNPLDLVS WNNKLPSTNP  60
SSSSSSNFDP SPLLSNPNSS SDFLHRHFPT AATAANGGGA GTGGLFHRHL HDLHHQGLGF  120
LRPIRGIPVY QNSPSSSSSS SFSYPIFGGG GNGGGGGQFN YNTAHRSRFL GRFPTKRNVR  180
APRMRWTTTL HARFVHAVKL LGGHERATPK SVLELMDVKD LTLAHVKSHL QVSISFSLFG  240
IDMRFGYDLN VGNSDVYDQN GSSGDTTNED ITYENEKSSR IRSSAPTTDD EHGYRQTVGD  300
KQDHHHHHPH KDFYSLWSNS SREALLQGTK NHSFENQPSQ HDQNYLEAKC SSHERTSDGS  360
SLTNLSAGTS PEKPNLEFTL GRSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-50	G2-like family protein