PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539493.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 184aa MW: 19582.4 Da PI: 5.6375 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.9 | 1.8e-05 | 22 | 44 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cg F++ L+ H+r+H XP_023539493.1 22 FKCGFCGSEFRSEKALHGHMRSH 44 89********************9 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00032 | 133 | 155 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cg+ F ++ L H +++ XP_023539493.1 133 YPCDFCGEAFASPQALGDHKSSC 155 99***************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MGKRKAADGD GDCDGSDRKN RFKCGFCGSE FRSEKALHGH MRSHPERNWR GMNPPVSAAA 60 VTATGSFSSS SSSSGGVDHE VRDRDCYSPL LTWSTTACRG RRPIGSSSSA SSGVVDATDT 120 GKENTDALLR NEYPCDFCGE AFASPQALGD HKSSCPCKPT ENGPQETKLL GFDLNELPPE 180 DGEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17180.1 | 1e-09 | C2H2 family protein |