PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539085.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 188aa    MW: 21330.9 Da    PI: 11.373
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.22.6e-11122144123
                     ---SS-EEEEEEE--TT-SS-EE CS
            WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                     ldDgy+WrKYGqK vk+++fpr 
  XP_023539085.1 122 LDDGYRWRKYGQKGVKNNKFPRE 144
                     59*******************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MMESYPDFLS ASSSSTSLSF QKMLISRASE PTGIHGSQFR EAAISGGFPL FPDVSGSYMS  60
VGTRSSTKED MVSVSKGSAV EVVEGGAETT EMTAARQGDN DKKKKTRSRR FAFQTRSQVD  120
ILDDGYRWRK YGQKGVKNNK FPRERNRRRR RGRGRGTHIT LHPNWERRSN PREILVSRIN  180
RKFCGNRE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143153RERNRRRRRGR
2145155RERNRRRRRGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.18e-18WRKY family protein