PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 188aa MW: 21330.9 Da PI: 11.373 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.2 | 2.6e-11 | 122 | 144 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYGqK vk+++fpr XP_023539085.1 122 LDDGYRWRKYGQKGVKNNKFPRE 144 59*******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MMESYPDFLS ASSSSTSLSF QKMLISRASE PTGIHGSQFR EAAISGGFPL FPDVSGSYMS 60 VGTRSSTKED MVSVSKGSAV EVVEGGAETT EMTAARQGDN DKKKKTRSRR FAFQTRSQVD 120 ILDDGYRWRK YGQKGVKNNK FPRERNRRRR RGRGRGTHIT LHPNWERRSN PREILVSRIN 180 RKFCGNRE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 153 | RERNRRRRRGR |
2 | 145 | 155 | RERNRRRRRGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 8e-18 | WRKY family protein |