PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539084.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 201aa MW: 22556.3 Da PI: 9.8799

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.5	1e-31	122	180	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYY+Ct++gC+vkk+v+r ++d+ vv++tYeg H h+ XP_023539084.1 122 LDDGYRWRKYGQKGVKNNKFPRSYYKCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHP 180 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MMESYPDFLS ASSSSTSLSF QKMLISRASE PTGIHGSQFR EAAISGGFPL FPDVSGSYMS 60 VGTRSSTKED MVSVSKGSAV EVVEGGAETT EMTAARQGDN DKKKKTRSRR FAFQTRSQVD 120 ILDDGYRWRK YGQKGVKNNK FPRSYYKCTH QGCKVKKQVQ RLTRDEGVVV TTYEGIHSHP 180 IQKSTDNFEH ILTQMQIYTS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	4e-57	WRKY family protein