PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 466aa MW: 50793.7 Da PI: 7.1175 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.5 | 2.6e-37 | 110 | 169 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rn+P+G+grr+nk+ XP_023539059.1 110 PDKIIPCPRCNSLQTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNLPIGAGRRRNKQL 169 7899*****************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MSFGFYLISP ISNMSSATHH LLSAPHFKDL AIKLFGRTIP LPESNISAAL QNLDGCNHFK 60 EGEHCVSGAE DSRSSVLVRD DEQKQASKEE EVHFKEQQGD GNEERVLKKP DKIIPCPRCN 120 SLQTKFCYFN NYNVNQPRHF CKNCQRYWTA GGTIRNLPIG AGRRRNKQLP SQYRPIILSS 180 SEGLATSRFE PSDSTNHHQL ISGLQSPAFR PSNANATLLK FGPEAPLCES METVLSLGDQ 240 KRSIQIGSAY SRDSPDEPSS CGSSSMTTNE FPKTVVDREA ARLSGSSNEN TSPNTVRCYP 300 VPQLVFPLNQ GGNGIVSSAM AKGSDGTSIS NPVQWLPATM LAVPGYCTPS LPLQFVAASY 360 WGCTPVWTAA GVHASQTSAA TIGSCATSSS PTLGKHSRDA SSSLTEEEES EKYVVVPKTV 420 RVDKVSEGSR SPIWTTFETT ESNADGKEHY REAPHLLETK TGSFYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39660.1 | 9e-42 | Dof family protein |