PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539057.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 316aa MW: 34320 Da PI: 6.514

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.9	2.6e-34	51	105	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl XP_023539057.1 51 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 105 79****************************************************8 PP
2	Myb_DNA-binding	77.9	1.3e-24	53	104	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ XP_023539057.1 53 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 104 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MLSGFSQEPA GMYSAISALP IDAGGHGKFQ GSLDGTNLPG DACLVLTSDP KPRLRWTAEL 60 HERFVDAVTQ LGGPDKATPK TIMRTMGVKG LTLYHLKSHL QKYRLGKQSF KESTENSKDA 120 SCMAESQETS SSLSPSSRLM TQDLNDGFQV TEALRVQMEV QRRLHEQLEV QRHLQLRIEA 180 QGKYLQTILD RACQALSDQT AASAGLEAAR EELSELAIKV SNDSKEMAPL ESQKVLPFSE 240 LAAALENRKA PTVMARIGDC SMDSCLTSAG SPVSPIGVGS TVTAMKRPRP AFSHGDSMVL 300 EGNARHEVEW MMSNIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	290	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-111	G2-like family protein