PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023539027.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SRS
Protein Properties Length: 390aa    MW: 43151.3 Da    PI: 8.7875
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023539027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70224.48e-085387539
          DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39
                    + +C+ CGn a+  C +e C+ CC  +   C+ hv
  XP_023539027.1 53 KPKCRVCGNVARSRCPYESCKSCCARNQNPCHIHV 87
                    568*******************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MAAPSPSVSN NSSDTATTTT TTASAVTANV AVSSNHLANR TGTPPKTLRG LNKPKCRVCG  60
NVARSRCPYE SCKSCCARNQ NPCHIHVLKA NATFPDKTPS SSSPLFDKQS ADPSSGSSLR  120
VNSLRYLSSN FSQFNNVQIP LRSRKPLTRK DAAAINEWRF SKLREFREGH IEAENEAFDR  180
YMQNVNLLEE IFSMKSMIDE SAKDGPSINS AAESNPEEMI PGLMLKLGSN PVTSENSRKR  240
IRKIVEDGLR KLQKVEATDS INEVTDRAEP VKVADQTNAN DGCKTEKGWH AKKAQALGNL  300
IDKLNKARNE EDLKSCLAVK HQLFHKDITS SQTESEETGT SKEQVTKKDL DSRRELGYSL  360
PKLINKTNID QETLNRIEAH FSSLEQIDNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.14e-91SRS family protein