PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023538960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 226aa MW: 25619.3 Da PI: 8.3825 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.4 | 1.2e-32 | 152 | 210 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ XP_023538960.1 152 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 210 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MEGSQRSELP NYQLQVSFLS NAPNPQPIHE MGFLHFEDHN QVLSFVAPNN NAATPTTAPP 60 TTTTTTTTTT AMPSAFTTPP HAHLLTRPSW SNDQVGTLDP KPGGDENCTG STSDGTNSWW 120 RNSNADKTKV KVRRKLREPR FCFQTRSDVD VLDDGYKWRK YGQKVVKNSL HPRSYYRCTH 180 SNCRVKKRVE RLSEDCRMVI TTYEGRHNHS PCDDSNSSDH EPFTSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 137 | KVRRKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 6e-66 | WRKY family protein |