PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538857.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 353aa    MW: 39151.9 Da    PI: 5.04
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19199249255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f ta eAa+a+++a+ kl+g
  XP_023538857.1 199 HYRGVRQRP-WGKFAAEIRDP---NrRGSRVWLGTFETAIEAARAYDRAAFKLRG 249
                     6********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
METVNLEQAT ALQNIKLHLL GELSPLPTNL AFDNLCVSSS DRSMSSGASS SSTSNCPLTI  60
SDYFNSDENF EFSSDFIRCE LSMSSNDDFF GFEMKPNVID LTTMNSAESI EFETKPFVFN  120
DSSSSSSSSS ISLYSNSSFE VESKTNLMSQ AANSNRKRAN LKISLPNKTT QWINFDTAEK  180
KNPVVIQRSK DLEAERKVHY RGVRQRPWGK FAAEIRDPNR RGSRVWLGTF ETAIEAARAY  240
DRAAFKLRGS KAILNFPLEA TNSYSEPMAA GKRQREEEVG EVVEAVALKK EKVEEVNPAS  300
VPAADVGYLK DMPLTPSIWS MVWDCETKGV FNIPPLSPLS PHPAFGFSQL VVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-45ERF family protein