PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023538809.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 362aa MW: 39934.5 Da PI: 7.551

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023538809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	211	266	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_023538809.1 211 KQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 266 79****************************************************97 PP
2	Myb_DNA-binding	43	1.1e-13	213	264	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ XP_023538809.1 213 RRCWSPELHRRFLHALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 264 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MIFSHKMQQI AFQMGFTLSD FALTLEQERR KVLMFQRELP LCLEIVTRAI DCCRHHVSET 60 TTENRLSECS EQTSSDVGPV LEEFIPINRY GVSDSEQQQQ QLQRQQQLPC ETQTENTDDS 120 DRNNLNLCPS DWLRSAQLWK DPSALNQDLP EKTAVVEVKS NGGAFRPFQK EKTGGGGTSS 180 TSAPAATSST AEMGSGGSNR REEKEAQNQR KQRRCWSPEL HRRFLHALQQ LGGSHVATPK 240 QIRELMKVDG LTNDEVKSHL QKYRLHTRRP STTMHHDDTS QTPQFLVVGG IWVPAAEYAT 300 TSTGEAVRAA TRNGMYAPVV RTTAQGLAST VAKAKAIVSG GAAECNSATT SSSTHTSSVS 360 PA

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MIFSHKMQQI AFQMGFTLSD FALTLEQERR KVLMFQRELP LCLEIVTRAI DCCRHHVSET  60
TTENRLSECS EQTSSDVGPV LEEFIPINRY GVSDSEQQQQ QLQRQQQLPC ETQTENTDDS  120
DRNNLNLCPS DWLRSAQLWK DPSALNQDLP EKTAVVEVKS NGGAFRPFQK EKTGGGGTSS  180
TSAPAATSST AEMGSGGSNR REEKEAQNQR KQRRCWSPEL HRRFLHALQQ LGGSHVATPK  240
QIRELMKVDG LTNDEVKSHL QKYRLHTRRP STTMHHDDTS QTPQFLVVGG IWVPAAEYAT  300
TSTGEAVRAA TRNGMYAPVV RTTAQGLAST VAKAKAIVSG GAAECNSATT SSSTHTSSVS  360
PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-84	G2-like family protein