PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538683.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 289aa    MW: 32134.2 Da    PI: 5.5414
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.72.7e-24118179159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDg++WrKYGqK++++++fpr+YYrCt++   gC++ k+v+r ++ p  + +tY g+H+++
  XP_023538683.1 118 VDDGHAWRKYGQKSIQNAKFPRNYYRCTHKfdqGCQASKQVQRVEDHPPKFRTTYYGHHTCT 179
                     59***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDCSWVESTP FDRKKVADQL LRGHEFARQL QAHLRSGSSC GGTVSDDLVA KILSSFSKTI  60
SVLNRYSDAD DINGSIVDNS PPEESEDSCR SSTPNDRRGC YKRRRNSHSW ARDSSSLVDD  120
GHAWRKYGQK SIQNAKFPRN YYRCTHKFDQ GCQASKQVQR VEDHPPKFRT TYYGHHTCTN  180
FLNTSDIVLG SSNFDDSGGV LLSFDTPTAA PAAVHDHERN QFFLPTDTDV DAMARVVKTE  240
VVMGGTAAAE EVCSPSDYMS AGPSPDDFSE VMMSGSIGDF EDDVLQFHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-42WRKY family protein