PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023538557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 252aa MW: 27772.5 Da PI: 6.4006 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.6 | 2.2e-07 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl XP_023538557.1 4 QCNVCEMAEATVLCCADEAALCWACDENIHAAnklaskHQRVPL 47 7******99*********************66899999999986 PP | |||||||
2 | zf-B_box | 27.8 | 5.2e-09 | 52 | 94 | 1 | 37 |
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s++++C+ ++e +fC +++ llC++C +++H H XP_023538557.1 52 SQMPRCDICQEASGYIFCLEDRALLCRKCDVAIHTAntcvtgH 94 689*******************************554555555 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MKIQCNVCEM AEATVLCCAD EAALCWACDE NIHAANKLAS KHQRVPLSGS SSQMPRCDIC 60 QEASGYIFCL EDRALLCRKC DVAIHTANTC VTGHQRFLLT GVKVALEPTD PIPCSSIANS 120 HSREISTKTK VRPPSDKEFS MPSSGEFSRS LSVQGGSDDF MTNRTLLTGD SASGGFSHWQ 180 IDELINLTGF NQNYGFMDNG SSKLGCFSPY IHYTTFKIDR NWRETELILR HDTLIVTGHG 240 RVLACYDIIL SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78600.1 | 6e-74 | DBB family protein |