PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023538548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GATA | ||||||||
Protein Properties | Length: 357aa MW: 38709.9 Da PI: 4.5451 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.7 | 4.9e-16 | 208 | 244 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_023538548.1 208 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 244 *******99*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MAAANPQPLQ ARPFQEHVQV PTMMGDDDGE YEDGGGGGGG GGGGGDVMDD VEEAHMTSVS 60 VANLGGLVMA SRTSELTLSF EGEVYVFPAV TPEKVQAVLL LLGGRDVPTS VPTMEVPYDH 120 MNRGMVDTPK RSNLSRRIAS LVRFREKRKE RCFDKKIRYT VRKEVAQRMH RKNGQFASLK 180 ESSGASSWES AHSCLQDGTR SETVLRKCQH CGVSENNTPA MRRGPAGPRT LCNACGLMWA 240 NKGTLRDLSK GGRNVSVDHT EPETPMDVKP TIMEGEFSGI PDEHGTPEDP GKTMTEGSSN 300 PSVNLDEEED INETTGGQTN SLPMQIVNDS TNDDEQEPLI ELANPSDTDI DIPTNFD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 127 | 132 | DTPKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 6e-67 | GATA family protein |