PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023538482.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 431aa MW: 46690 Da PI: 7.4842

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023538482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.9	6.4e-37	37	142	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 +g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i+el+++++ ++s + ++ ++++s + ++++ XP_023538482.1 37 TGRKDRHSKVCTAKGTRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWNPSTAnasTQRQEQQSLNDENESllsvq 131 79**************************************************************5555533321233333333333333355555 PP TCP 89 ..........k 89 + XP_023538482.1 132 rdvfsptgnrR 142 44444443330 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGESHRQTAT SSRLGMRIGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GTRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KASIDELAEL PAWNPSTANA STQRQEQQSL 120 NDENESLLSV QRDVFSPTGN RRASVVGSHS RVSEFPLQNL QHTQMGGGPN NSTSSFLPPS 180 LDSDSIADTI KSFFPIGTAA AETTSSSIQF QNFPQDLLSR TSSQNQDLRL SLQSFQDPIA 240 IHRHHHAQHQ SQGHQNDHVL FPGTATLSGF DVTTAGWSEH NNLNPAEISR FPRITSWNAS 300 GAETGSGGSS GHGGAAIRSA GYVFNSPHLS TALPPSSLMQ PLFGENQFFS QRGPLQSSNT 360 PSIRAWIDQS LTATDHQQHH MTPSIHQSSY TSLGFASGGF SGFHIPTRIQ GDEEHNGISD 420 KPSSASSDSR H

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGESHRQTAT SSRLGMRIGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GTRDRRVRLS  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KASIDELAEL PAWNPSTANA STQRQEQQSL  120
NDENESLLSV QRDVFSPTGN RRASVVGSHS RVSEFPLQNL QHTQMGGGPN NSTSSFLPPS  180
LDSDSIADTI KSFFPIGTAA AETTSSSIQF QNFPQDLLSR TSSQNQDLRL SLQSFQDPIA  240
IHRHHHAQHQ SQGHQNDHVL FPGTATLSGF DVTTAGWSEH NNLNPAEISR FPRITSWNAS  300
GAETGSGGSS GHGGAAIRSA GYVFNSPHLS TALPPSSLMQ PLFGENQFFS QRGPLQSSNT  360
PSIRAWIDQS LTATDHQQHH MTPSIHQSSY TSLGFASGGF SGFHIPTRIQ GDEEHNGISD  420
KPSSASSDSR H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	7e-72	TCP family protein