PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023538474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 431aa MW: 46690 Da PI: 7.4842 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 118.9 | 6.4e-37 | 37 | 142 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 +g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i+el+++++ ++s + ++ ++++s + ++++ XP_023538474.1 37 TGRKDRHSKVCTAKGTRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWNPSTAnasTQRQEQQSLNDENESllsvq 131 79**************************************************************5555533321233333333333333355555 PP TCP 89 ..........k 89 + XP_023538474.1 132 rdvfsptgnrR 142 44444443330 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence |
MGESHRQTAT SSRLGMRIGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GTRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KASIDELAEL PAWNPSTANA STQRQEQQSL 120 NDENESLLSV QRDVFSPTGN RRASVVGSHS RVSEFPLQNL QHTQMGGGPN NSTSSFLPPS 180 LDSDSIADTI KSFFPIGTAA AETTSSSIQF QNFPQDLLSR TSSQNQDLRL SLQSFQDPIA 240 IHRHHHAQHQ SQGHQNDHVL FPGTATLSGF DVTTAGWSEH NNLNPAEISR FPRITSWNAS 300 GAETGSGGSS GHGGAAIRSA GYVFNSPHLS TALPPSSLMQ PLFGENQFFS QRGPLQSSNT 360 PSIRAWIDQS LTATDHQQHH MTPSIHQSSY TSLGFASGGF SGFHIPTRIQ GDEEHNGISD 420 KPSSASSDSR H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 7e-72 | TCP family protein |