PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537864.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 385aa MW: 43607.4 Da PI: 7.8625

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537864.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.6	6.5e-26	157	222	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ lt+kf++l++++e+g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek+ n+irwkg XP_023537864.1 157 RYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADIL---KV--QKRRIYDITNVLEGIGLIEKTTTNHIRWKG 222 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MLNAVEDLLL RHGHSDFRSH LLPSHSHHRG DMSLSSSSAS SSLAQPIPQC FRQYHRSSPP 60 SDQSNACDGR LALDAHSTVA MLDLKRTYDI NDSEALASKR AVASEQRMRS NDSSCEPVSN 120 ATEKQNKKLK LQKNSKSRTK KSTDENLDGP NLSTNGRYDS SLGFLTKKFI RLVQEAEDGT 180 LDLNKTADIL KVQKRRIYDI TNVLEGIGLI EKTTTNHIRW KGGVRHDAQE LNDQVGRFKA 240 EVKSLYADER RLDELIRMKQ ELLRNLEENE NHRKNLFMTE EDILQIPCFK NQTLIAVKAP 300 QASYIEVPDP DEEACFSERQ CRLIIKSTTG PIDLYLLSIF VGKRYAENPS TFSSLFPLTL 360 SKCLGLLFVL YISSFIHIVI HEFAV

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MLNAVEDLLL RHGHSDFRSH LLPSHSHHRG DMSLSSSSAS SSLAQPIPQC FRQYHRSSPP  60
SDQSNACDGR LALDAHSTVA MLDLKRTYDI NDSEALASKR AVASEQRMRS NDSSCEPVSN  120
ATEKQNKKLK LQKNSKSRTK KSTDENLDGP NLSTNGRYDS SLGFLTKKFI RLVQEAEDGT  180
LDLNKTADIL KVQKRRIYDI TNVLEGIGLI EKTTTNHIRW KGGVRHDAQE LNDQVGRFKA  240
EVKSLYADER RLDELIRMKQ ELLRNLEENE NHRKNLFMTE EDILQIPCFK NQTLIAVKAP  300
QASYIEVPDP DEEACFSERQ CRLIIKSTTG PIDLYLLSIF VGKRYAENPS TFSSLFPLTL  360
SKCLGLLFVL YISSFIHIVI HEFAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	196	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.2	9e-74	E2F/DP family protein