PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537517.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 352aa    MW: 39645.9 Da    PI: 8.285
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53.2e-052322711155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L++l+ +      +K + a++L +A+ YI+ Lq
  XP_023537517.1 232 IRKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAISYINFLQ 271
                     57788999*********998.....8*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MYRYEHGETH QPLQGRTVEK TKKQACRFCN SVHGLEHTTM DFSANLHHQL QLENQLLLGS  60
GNGHAWNPDV TFSPSCEFEP NFHLQDMNPA TIIDGESCYT YTSLQHYFHG SKDKKFIEKG  120
EEASASSPKT NGTLNSHCCS FEDLNKIAQS CCCCSTKIHP TLNVSSRQPL MAELSSFFGF  180
DHTVPFQQST KMPNHEITQA KRPYSLKQQK TIEAPPKKPR VEPRATCPPL KIRKEKLGDR  240
IAALQQLVAP FGKTDTASVL MEAISYINFL QNQVEMLSHS YMKSCRSKNY KTTCRDESNE  300
KDKKPESDLK AKGLCLVPTA CISYLPEDTS TGGRIGNIWP PLTAASFNRR TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.18e-43bHLH family protein