PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537460.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 232aa MW: 24504 Da PI: 7.8211

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121	4.3e-38	27	85	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + ++cprCds ntkfCyynny+lsqPr+fCk+CrryWt+GG+lr+vPvGgg+rkn k+s XP_023537460.1 27 DPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNSKRS 85 5689***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MPSESANPNR TNRPQHTMPF PPPPQSDPRP CPRCDSLNTK FCYYNNYNLS QPRHFCKSCR 60 RYWTHGGTLR DVPVGGGSRK NSKRSRYHNA PSSASSSSSS VSLLPPAAAA VTNDINVNLN 120 DTMSGPATFT SLLSSQGSGF LALGGYGSGS GSAHAPAAFD EMGFGLGRGL WDTACTYTEV 180 GDIVGAPETS SSGYNTWQMN DTNGDGAGGG VVDGDLLNWP DLAISMQGKS LK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	4e-32	Dof family protein