PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537448.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family BES1
Protein Properties Length: 310aa    MW: 34050 Da    PI: 8.9476
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822209.87.3e-65111462141
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     + +rkp+w+ErEnn+ RERrRRaiaakiyaGLRaqGn++lpk++DnneVlkALc++AGw+vedDGttyrkg+kp+  ++++g+s++++p ss++ 
  XP_023537448.1  11 TCRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCKPP-PMNIVGTSTRITPYSSQNP 104
                     569************************************************************************.******************* PP

          DUF822  97 slkssalaspvesysaspksssfpspssldsislasaasllpvls 141
                     s+ ss+++sp++sy+ sp+sssfpsps+ld  +    ++l+p+l+
  XP_023537448.1 105 SPLSSSFPSPMASYQVSPSSSSFPSPSRLDADNP---SNLIPYLR 146
                     *****************************98755...45666554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MTSDGATSAS TCRRKPSWRE RENNRTRERR RRAIAAKIYA GLRAQGNFNL PKHCDNNEVL  60
KALCADAGWT VEDDGTTYRK GCKPPPMNIV GTSTRITPYS SQNPSPLSSS FPSPMASYQV  120
SPSSSSFPSP SRLDADNPSN LIPYLRQAIP RSLPPLRISN SAPVTPPLSS PASRTPQPFL  180
NWEVTAKESF SSLNYPFFAV SAPASPTRPQ LHTPTTIHEC DESESSTNAS NQWAFLHAYP  240
QSTLTMPTSP TFNLVKPADQ HDLQGGFIKE NGRGSEFEFL GRKVKPWEGE KIHEVGLEDL  300
ELTLGSSSKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11332RRKPSWRERENNRTRERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-100BES1 family protein