PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537403.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 589aa MW: 63490.1 Da PI: 7.9476

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.7	5.4e-14	118	157	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C N+ e+ XP_023537403.1 118 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCLNCYNNVEN 157 89************************.******9875 PP
2	TCR	50.9	3.1e-16	202	241	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_023537403.1 202 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 241 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MGEEDSAGVP PKKAQSDGAA LSNSSSSDIP SKKLARQLDF TGYGGAPHPQ SHSNSHSQSQ 60 TPLVSQNLQQ AQPKPQPQMV AASIAPLAPH SSVRTVKSES PMSRARPAVE AKDSTPKKQK 120 QCNCKHSRCL KLYCECFASG IYCDGCNCLN CYNNVENDAA RREAVEATLE RNPNAFRPKI 180 ASSPHGMRDN REEAGELLML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF 240 EGSEERQALF HGDHGNNMVF IQQAANAAIT GAIGSSGYAS PPVSKKRKGQ ELYFGSTAKE 300 LSTHRPVAFQ QANHVKATAP PLPSFPIAGV GSPSLLGPSK FTYRSLMADI IQSQNLKDLC 360 SVLVVLSSEA AKTFQDQTNA TEKQADCQIE TSVASSNQDT SQKKDVSNEK AAADDRSSAN 420 QTNKTTTDDS NSDGGDVPKG ATMSPGTLAL MCDEQDTILM AAASPNRLMG PGCSTSSQLP 480 HRQDMSEVYA EQERIVLTKF RDCLNRLITL GEIKETQCST LARSEVGNQE HSLNHGTTNS 540 RTETQTHLDQ LNNKVTKSSI PPLGKTTQTV TAAVMTLSND QRQKVLPLS

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MGEEDSAGVP PKKAQSDGAA LSNSSSSDIP SKKLARQLDF TGYGGAPHPQ SHSNSHSQSQ  60
TPLVSQNLQQ AQPKPQPQMV AASIAPLAPH SSVRTVKSES PMSRARPAVE AKDSTPKKQK  120
QCNCKHSRCL KLYCECFASG IYCDGCNCLN CYNNVENDAA RREAVEATLE RNPNAFRPKI  180
ASSPHGMRDN REEAGELLML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF  240
EGSEERQALF HGDHGNNMVF IQQAANAAIT GAIGSSGYAS PPVSKKRKGQ ELYFGSTAKE  300
LSTHRPVAFQ QANHVKATAP PLPSFPIAGV GSPSLLGPSK FTYRSLMADI IQSQNLKDLC  360
SVLVVLSSEA AKTFQDQTNA TEKQADCQIE TSVASSNQDT SQKKDVSNEK AAADDRSSAN  420
QTNKTTTDDS NSDGGDVPKG ATMSPGTLAL MCDEQDTILM AAASPNRLMG PGCSTSSQLP  480
HRQDMSEVYA EQERIVLTKF RDCLNRLITL GEIKETQCST LARSEVGNQE HSLNHGTTNS  540
RTETQTHLDQ LNNKVTKSSI PPLGKTTQTV TAAVMTLSND QRQKVLPLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-180	CPP family protein