PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537396.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 337aa    MW: 37453.7 Da    PI: 7.3848
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.33.3e-30197250458
       CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +YVNaKQy++I++RR++Rakle+++k+ +++rkpylheSRh hA++R RgsgGrF
  XP_023537396.1 197 IYVNAKQYHGIIRRRKSRAKLEAQNKV-IRNRKPYLHESRHCHAVNRVRGSGGRF 250
                     9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MMAIPRENFA QKNLDQNSVH LLFPYTVDSM PWRNSNEQKI QMALSDNITL KNETPPQPHH  60
EQSGLRLRDQ ESSTAYSMGQ SLHKVRAMEV QNAQEQCISS ESGLDENYGE SVENQMKPVI  120
LFSNPEYMFN PPQVDSSHLM ARVPYPYPYV DPSYGGLFCS AYGQMASNTQ AQVNSNVVGS  180
TPARVPLPHG LAEDGLIYVN AKQYHGIIRR RKSRAKLEAQ NKVIRNRKPY LHESRHCHAV  240
NRVRGSGGRF LSAKKDQPPD HITPPTDWCQ QKDTPDFNTC SSETGDPGTM TATCSETTSI  300
SSGSVMFGRT WSDSQFSAVS SSGGFVHDGA RTHASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.16e-36NF-YA family protein