PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537394.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 343aa    MW: 38149.4 Da    PI: 7.0281
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.33.4e-30203256458
       CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +YVNaKQy++I++RR++Rakle+++k+ +++rkpylheSRh hA++R RgsgGrF
  XP_023537394.1 203 IYVNAKQYHGIIRRRKSRAKLEAQNKV-IRNRKPYLHESRHCHAVNRVRGSGGRF 256
                     9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MMAIPRENFA QKNLDQNSVH LLFPYTVDSM PWRNSNEQKI QMALSDNITL KNETPPQPHH  60
EQSGLRLRDQ ESSTAYSMGQ SLHKVRAMEV QNAQEQCISS ESGLDENYGE SVENQMKPVI  120
LFSNPEYMFN PPQVDSSHLM ARVPYPYPYV DPSYGGLFCS AYGQMASNLH DSDQTQAQVN  180
SNVVGSTPAR VPLPHGLAED GLIYVNAKQY HGIIRRRKSR AKLEAQNKVI RNRKPYLHES  240
RHCHAVNRVR GSGGRFLSAK KDQPPDHITP PTDWCQQKDT PDFNTCSSET GDPGTMTATC  300
SETTSISSGS VMFGRTWSDS QFSAVSSSGG FVHDGARTHA SVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-34NF-YA family protein