PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YA | ||||||||
Protein Properties | Length: 343aa MW: 38149.4 Da PI: 7.0281 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 96.3 | 3.4e-30 | 203 | 256 | 4 | 58 |
CBFB_NFYA 4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +YVNaKQy++I++RR++Rakle+++k+ +++rkpylheSRh hA++R RgsgGrF XP_023537393.1 203 IYVNAKQYHGIIRRRKSRAKLEAQNKV-IRNRKPYLHESRHCHAVNRVRGSGGRF 256 9**************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MMAIPRENFA QKNLDQNSVH LLFPYTVDSM PWRNSNEQKI QMALSDNITL KNETPPQPHH 60 EQSGLRLRDQ ESSTAYSMGQ SLHKVRAMEV QNAQEQCISS ESGLDENYGE SVENQMKPVI 120 LFSNPEYMFN PPQVDSSHLM ARVPYPYPYV DPSYGGLFCS AYGQMASNLH DSDQTQAQVN 180 SNVVGSTPAR VPLPHGLAED GLIYVNAKQY HGIIRRRKSR AKLEAQNKVI RNRKPYLHES 240 RHCHAVNRVR GSGGRFLSAK KDQPPDHITP PTDWCQQKDT PDFNTCSSET GDPGTMTATC 300 SETTSISSGS VMFGRTWSDS QFSAVSSSGG FVHDGARTHA SVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 2e-34 | NF-YA family protein |