PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537380.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GRF

Protein Properties

Length: 295aa MW: 33896.8 Da PI: 8.3064

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.6	6.1e-25	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrg++rsrk++e XP_023537380.1 77 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP
2	QLQ	58.1	2.6e-20	9	42	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FTaaQ+q+L++Q+l++Ky+a++ P+Pp+Ll+ i XP_023537380.1 9 PFTAAQWQELEHQALIFKYMASGIPLPPHLLFTI 42 8*****************************9866 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MSGGRNRFPF TAAQWQELEH QALIFKYMAS GIPLPPHLLF TINTTSFHSP FISTLFPHQY 60 AHVGWNYLQM GSGRKIDPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GKNRSRKPVE 120 VLKTTTHSPA ISSITHNSTL PSETHPQHLH PFLYQHGCSS TPQNSITSLL LDPDYRNRYG 180 YGVKEDVVDE HPLQSEERCG NIRGFSASNM EDSWQLSPLT MSCSSSSFRH KNCSPLQGSD 240 YSYKEPEKSM HHFLDEWSPK DTESWVDLNT TRLSISIPNS SQHEFSSNNK HYQNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-50	GRF family protein