PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRF | ||||||||
Protein Properties | Length: 296aa MW: 34052.9 Da PI: 8.4828 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.6 | 6.2e-25 | 77 | 120 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrg++rsrk++e XP_023537379.1 77 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP | |||||||
2 | QLQ | 58.1 | 2.6e-20 | 9 | 42 | 2 | 35 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FTaaQ+q+L++Q+l++Ky+a++ P+Pp+Ll+ i XP_023537379.1 9 PFTAAQWQELEHQALIFKYMASGIPLPPHLLFTI 42 8*****************************9866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MSGGRNRFPF TAAQWQELEH QALIFKYMAS GIPLPPHLLF TINTTSFHSP FISTLFPHQY 60 AHVGWNYLQM GSGRKIDPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GKNRSRKPVE 120 VLKTTTHSPA ISSITHNSTL PSETHPQHLH PFLYQHGCSS TPQNSITSLL LDPDYRRNRY 180 GYGVKEDVVD EHPLQSEERC GNIRGFSASN MEDSWQLSPL TMSCSSSSFR HKNCSPLQGS 240 DYSYKEPEKS MHHFLDEWSP KDTESWVDLN TTRLSISIPN SSQHEFSSNN KHYQNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-50 | GRF family protein |