PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537302.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 356aa    MW: 40661.5 Da    PI: 4.5428
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.96.9e-33431352103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+++++ed+ +++++sws+  nsf+v+d  ++++++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++         weF+++ F  g+++ll++
  XP_023537302.1  43 FLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRNLLKT 128
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     ikr++++
  XP_023537302.1 129 IKRRRHS 135
                     ***9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDELEAKTKP DGVPASSSST SPSSLRTSPR PIEGLHDVGP PPFLSKTFDM VEDPLTDSIV  60
SWSKARNSFI VWDYLKLSTT LLPRYFKHSN FSSFIRQLNT YGFRKVDPDR WEFANEGFLG  120
GQRNLLKTIK RRRHSSQSSQ QQGGTCVELG QFGLEGELER LRRDRSSLIV ELVRLRQQHQ  180
SSREQVMAME DRLQKAESKQ KQIMTFLSKA LKNPSFIQKL IHSNQIRELT SVGIGRKRRL  240
TASSSLENLQ DETILAAVKQ EQLETPEPDM ESLLTANFED ESSSEIKDVD HSIHEEILDE  300
LWNEDLMAEN PEEEGVMVGD QSEIDVEVED LIDEPPDWTE DLEELVDQMG FLQPKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126132LKTIKRR
2160165RLRRDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.17e-93HSF family protein