PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537287.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 372aa    MW: 40423.6 Da    PI: 5.4101
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20165214255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_023537287.1 165 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 214
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MPALMDFYGC RDLQSYPVGG ELMEALEPFM KAASSSSSSF LPSFSPSSSS FVPDFSSSFS  60
SIQTESTSYP SDCSPPVAYS YSDGFSANNL HGLEQSASIG LNYLTPFQIQ QIQSQFGLQT  120
QIQPVWGHVN NQQELTKNQM NGVNLLGPKA IPMKHAGSPP KSTKLYRGVR QRHWGKWVAE  180
IRLPRNRTRL WLGTFDTAEE AALAYDKAAY KLRGDFARLN FPQLKHHGSS VGGDFGEYKP  240
LHSAVDAKLD AICQTLAESQ KQGKSNRSAS SRKSKSSSIS STVGSESQAP TVIDSDDDQK  300
ASDVRSSGSE ICCKAENSSS PVSAESDESA GSSPLSDLTF PDPTDSPWEQ PSESSMLQKY  360
PSEIDWASIF TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-58ERF family protein