PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537137.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 332aa MW: 36817.5 Da PI: 5.9688

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.5	7.7e-16	51	100	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + ++ L +++eY+++Lq XP_023537137.1 51 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTVSFLLEVIEYVQYLQ 100 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MRTAKSVQED EEYEEDELVA KREGPASTYN ANSSIGNSKD GKHNDKANAI RSKHSVTEQR 60 RRSKINERFQ ILRDLIPHSD QKRDTVSFLL EVIEYVQYLQ EKVQKYEGSY QNWSGEPTKL 120 IPWRNSHWRM PTFVGHPESV KNGSASGPMY SGKFDDNNIS ISPAMLASSQ NPLESHTGRD 180 ILQDADITNK VPLPMSLEGN THASIRSDGV HDQSLHVPIS DAQTTECPIT NNASSQPEEM 240 SIQGGTISVS SLYSEGLLNS LTQALQNTGL DLSQASISVQ IDLGKRANKR TPCGTPIYKE 300 TGNPPSGHPS MAHEGDLDSE DDSDQVKKRR RT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-101	bHLH family protein