PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537095.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SRS
Protein Properties Length: 295aa    MW: 31946.4 Da    PI: 7.9854
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702195.32e-60832183153
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                     +g+++CqdCGnqakkdCa+ RCRtCCksrgf+C+thvkstWvpaakrrerq                ++skr re++s++++a+++ +l+ +   
  XP_023537095.1  83 AGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQFC------------GGDNSKRLRETQSATATATATPRLPAS--- 162
                     6899*********************************************9643............356788888876666666666666655... PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                      ++e +++P+ev+s+avfrcv+vs++dd++ee+aYqtav+igGhvfkGiLydqG e
  XP_023537095.1 163 FTSELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSE 218
                     567999************************************************87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MAELFYVGGR EEGPPNKEQQ HKQTQPTLFM YRNDQQIHHK GFEIWPPHYQ THFSSAVGQS  60
RRTDSDHPSR SAFTATRPAA ATAGGINCQD CGNQAKKDCA YLRCRTCCKS RGFHCQTHVK  120
STWVPAAKRR ERQFCGGDNS KRLRETQSAT ATATATPRLP ASFTSELEKF PSEVNSPAVF  180
RCVKVSAMDD EDEEFAYQTA VNIGGHVFKG ILYDQGSEVH YTAGESSSGH GGDGSVHPLN  240
LIAGPSNLAA ASTTTSAATS SNPTAAVAPL LDPSIYPAPL NAFMAGTQFF PPSRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.11e-70SRS family protein