PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023537095.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SRS | ||||||||
Protein Properties | Length: 295aa MW: 31946.4 Da PI: 7.9854 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 195.3 | 2e-60 | 83 | 218 | 3 | 153 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 +g+++CqdCGnqakkdCa+ RCRtCCksrgf+C+thvkstWvpaakrrerq ++skr re++s++++a+++ +l+ + XP_023537095.1 83 AGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQFC------------GGDNSKRLRETQSATATATATPRLPAS--- 162 6899*********************************************9643............356788888876666666666666655... PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++e +++P+ev+s+avfrcv+vs++dd++ee+aYqtav+igGhvfkGiLydqG e XP_023537095.1 163 FTSELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSE 218 567999************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MAELFYVGGR EEGPPNKEQQ HKQTQPTLFM YRNDQQIHHK GFEIWPPHYQ THFSSAVGQS 60 RRTDSDHPSR SAFTATRPAA ATAGGINCQD CGNQAKKDCA YLRCRTCCKS RGFHCQTHVK 120 STWVPAAKRR ERQFCGGDNS KRLRETQSAT ATATATPRLP ASFTSELEKF PSEVNSPAVF 180 RCVKVSAMDD EDEEFAYQTA VNIGGHVFKG ILYDQGSEVH YTAGESSSGH GGDGSVHPLN 240 LIAGPSNLAA ASTTTSAATS SNPTAAVAPL LDPSIYPAPL NAFMAGTQFF PPSRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 1e-70 | SRS family protein |