PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536998.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 304aa    MW: 32619.2 Da    PI: 7.0748
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17206242135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCgt++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  XP_023536998.1 206 CTNCGTSSmaTPMMRRGPSGPRSLCNACGLFWANRGT 242
                     *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MYGRPQPLTV GDQIASVPDC GDGGEPLDNR LVRYGAHALE DGAGVGGMIE DLNPDAVYAS  60
AGDGSDMAIQ RSDGSSQLTL SFRGQVYLFD AVSPEKVQAV LLLLGGSELS SGQQSVDLVT  120
QSQRNAVDFP GRSSQPQRAA SLSRFRQKRK ERCFDKKVRY GVRQEVAFRM QRNKGQFTSS  180
KKPDGSYSHG SVSEQGQEES PLETLCTNCG TSSMATPMMR RGPSGPRSLC NACGLFWANR  240
GTLRDLSKRS QDHRVTPAGQ FESDAAAAAA APPVKDLDCR QGTHAHSDLV SFSNGDNSAL  300
MAEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.32e-80GATA family protein