PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536996.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 357aa    MW: 39703.2 Da    PI: 7.6543
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.2e-17291324132
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 
                     C+nCgt++  Tp++Rrgp+g+++LCnaCGl+++ 
  XP_023536996.1 291 CTNCGTSSmaTPMMRRGPSGPRSLCNACGLFWAN 324
                     ********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MFFTVHCPFA LLAFLWSPQT QPTLYTVTTH FARHFHIRSS LLPSSLLVGL DSSVFYQFSF  60
RPFLFFFLNF CNVLQTPLIL FLPELMYGRP QPLTVGDQIA SVPDCGDGGE PLDNRLVRYG  120
AHALEDGAGV GGMIEDLNPD AVYASAGDGS DMAIQRSDGS SQLTLSFRGQ VYLFDAVSPE  180
KVQAVLLLLG GSELSSGQQS VDLVTQSQRN AVDFPGRSSQ PQRAASLSRF RQKRKERCFD  240
KKVRYGVRQE VAFRMQRNKG QFTSSKKPDG SYSHGSVSEQ GQEESPLETL CTNCGTSSMA  300
TPMMRRGPSG PRSLCNACGL FWANRIVWLM DMPDLCKGLI GFYDVRCISY LYEIFSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.21e-66GATA family protein